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Concept

sample preparation method entity

URI http://vocab.nerc.ac.uk/collection/S01/current/S019/
Within Vocab BODC parameter semantic model component names
Alternative Labels
Definition Portion of the BODC parameter semantic model describing pre-analysis processing. It is part of the how theme.
Date 2018-08-23T15:25:14
Identifier SDN:S01::S019
Note accepted
Has Current Version 2
Version 1
version 2
Broader S01:S013 how theme Mapping: 1473777
Narrower
S03 BODC parameter semantic model sample preparation entity descriptions - (273) [+]
S03:S0336 0.25M hydroxylamine hydrochloride + 25% acetic acid leaching Mapping: 1472222
S03:S0337 14C leucine doping, incubation, acidification, purging and trapping CO2 Mapping: 1472223
S03:S0338 14C-glucose doping, incubation in the dark, purging with air, acid washing Mapping: 1472224
S03:S0339 14CO3 doping, incubation at 100uE/m2/s, acidification, scintillant addition Mapping: 1472225
S03:S0340 14CO3 doping, incubation in the dark, acidification, scintillant addition Mapping: 1472227
S03:S03445 15N2-enriched seawater addition, on-deck incubation at simulated in-situ light level, filtration Mapping: 1472276
S03:S0342 1M sodium acetate at pH 5 + 0.25M hydroxylamine hydrochloride leaching Mapping: 1472248
S03:S0343 1M sodium acetate leaching at pH 5 Mapping: 1472259
S03:S0344 35-S DMS doping, incubation in the dark, filtration Mapping: 1472270
S03:S0345 35-S DMS tracer doping, incubation in the dark, filtration, purging of volatiles Mapping: 1472281
S03:S0346 35-S DMSP doping, incubation in the dark, filtration Mapping: 1472285
S03:S03219 3H leucine doping, incubation in the dark, centrifugation Mapping: 1472192
S03:S033 acetone extraction Mapping: 1472215
S03:S0360 acid digestion Mapping: 1472298
S03:S0361 acid digestion of filter residue Mapping: 1472299
S03:S03447 acid digestion of leached filter residue Mapping: 1472278
S03:S0362 acid leaching of filter residue Mapping: 1472300
S03:S0363 acid liberation, purification and trapping CO2 Mapping: 1472301
S03:S0366 acidification Mapping: 1472303
S03:S0365 acidification, combustion Mapping: 1472302
S03:S03435 acidification, isotope dilution Mapping: 1472265
S03:S03452 acidification, NaOH hydrolysis Mapping: 1472284
S03:S03451 acidification, NaOH hydrolysis, NaBH4 reduction Mapping: 1472283
S03:S034 acridine orange staining Mapping: 1472226
S03:S0347 AgI precipitation Mapping: 1472286
S03:S03433 anion exchange chromatography Mapping: 1472263
S03:S0367 antibody doping Mapping: 1472304
S03:S03230 bulk aerosol extraction Mapping: 1472204
S03:S0400 cascade filtration, acetone extraction Mapping: 1472339
S03:S03412 cascade impaction Mapping: 1472240
S03:S0348 Ce-AS reaction Mapping: 1472287
S03:S0368 centrifugal extraction Mapping: 1472305
S03:S0369 centrifugal extraction, filtration Mapping: 1472306
S03:S0370 centrifugal extraction, filtration, acidification Mapping: 1472308
S03:S0403 centrifugal extraction, filtration, oxidation Mapping: 1472342
S03:S0371 centrifugation Mapping: 1472309
S03:S0372 centrifugation, acetone extraction Mapping: 1472310
S03:S0373 centrifugation, acid digestion Mapping: 1472311
S03:S0374 centrifugation, acidification Mapping: 1472312
S03:S0375 centrifugation, acidification, combustion Mapping: 1472313
S03:S0376 centrifugation, combustion Mapping: 1472314
S03:S0377 centrifugation, no acidification Mapping: 1472315
S03:S0378 chloroform extraction Mapping: 1472316
S03:S0380 combustion Mapping: 1472318
S03:S0381 combustion at 375C and acidification Mapping: 1472319
S03:S0382 compression into pellets Mapping: 1472320
S03:S031 DAPI staining Mapping: 1472074
S03:S032 DAPI/proflavine staining Mapping: 1472166
S03:S03430 denitrification to N2O by cultured bacteria Mapping: 1472260
S03:S0383 diffusive gel thin-film (DGT) sampling, extraction into HNO3 Mapping: 1472321
S03:S03152 digestion, purification, plating Mapping: 1472120
S03:S035 dilution experiment incubations Mapping: 1472289
S03:S0384 disaggregation Mapping: 1472322
S03:S0385 doping with fluorescine diacetate, incubation Mapping: 1472323
S03:S0386 drying Mapping: 1472324
S03:S03402 drying, grinding, NaOH extraction and filtration Mapping: 1472229
S03:S0349 EDTA/SDS extraction Mapping: 1472288
S03:S0387 enzyme digestion, purging, cryogenic trapping Mapping: 1472325
S03:S03231 eosin staining Mapping: 1472205
S03:S03453 epibenthic sampling Mapping: 1538377
S03:S0388 equilibration with air, drying Mapping: 1472326
S03:S03405 equilibration with and cryogenic trapping of CO2 Mapping: 1472232
S03:S0389 extraction by squeezing, filtration Mapping: 1472327
S03:S0390 extraction by squeezing, filtration, acidification Mapping: 1472329
S03:S0391 extraction by squeezing, filtration, barium/gelatine treatment Mapping: 1472330
S03:S0392 extraction, filtration Mapping: 1472331
S03:S0393 filtration Mapping: 1472332
S03:S0394 filtration with acid impregnated filter Mapping: 1472333
S03:S0395 filtration with Teflon filter Mapping: 1472334
S03:S0398 filtration, acetone extraction Mapping: 1472337
S03:S0399 filtration, acid digestion Mapping: 1472338
S03:S03448 filtration, acid leaching Mapping: 1472279
S03:S03100 filtration, acidification Mapping: 1472076
S03:S03103 filtration, acidification, chelation, solvent extraction Mapping: 1472079
S03:S03101 filtration, acidification, combustion Mapping: 1472077
S03:S03436 filtration, acidification, isotope dilution Mapping: 1472266
S03:S03434 filtration, acidification, pre-concentration, ion-exchange chromatography Mapping: 1472264
S03:S03429 filtration, acidification, UV irradiation Mapping: 1472258
S03:S03102 filtration, alkali hydrolysis Mapping: 1472078
S03:S03425 filtration, Bligh and Dyer extraction Mapping: 1472254
S03:S03104 filtration, combustion Mapping: 1472080
S03:S03449 filtration, denitrification to N2O by cultured bacteria Mapping: 1472280
S03:S03432 filtration, DNA extraction Mapping: 1472262
S03:S03409 filtration, DNA extraction, PicoGreen staining Mapping: 1472236
S03:S03410 filtration, DNA extraction, PicoGreen staining, primer selection Mapping: 1472238
S03:S0402 filtration, drying Mapping: 1472341
S03:S03442 filtration, ethanol extraction Mapping: 1472273
S03:S03105 filtration, freon extraction Mapping: 1472081
S03:S0396 filtration, HgCl2 preservation Mapping: 1472335
S03:S03124 filtration, hydrolysis Mapping: 1472102
S03:S03106 filtration, in-line preconcentration Mapping: 1472082
S03:S03107 filtration, incubation Mapping: 1472083
S03:S03419 filtration, incubation at unspecified light level, purging, cryogenic trapping Mapping: 1472247
S03:S03108 filtration, incubation in natural sunlight, enzyme reduction to DMS Mapping: 1472084
S03:S03109 filtration, incubation in natural sunlight, purging, cryogenic trapping Mapping: 1472085
S03:S03110 filtration, incubation in the dark, enzyme reduction to DMS Mapping: 1472087
S03:S03111 filtration, incubation in the dark, purging, cryogenic trapping Mapping: 1472088
S03:S03112 filtration, incubation in ultra-violet light, enzyme reduction to DMS Mapping: 1472089
S03:S03440 filtration, indophenol synthesis, SPE extraction, HPLC purification Mapping: 1472271
S03:S03417 filtration, leaching with pH 4.7 ammonium acetate buffer Mapping: 1472245
S03:S03426 filtration, light and dark bottle incubation Mapping: 1472255
S03:S03113 filtration, methanol extraction Mapping: 1472090
S03:S0397 filtration, Mn absorption Mapping: 1472336
S03:S03438 filtration, N, N-dimethylformamide extraction Mapping: 1472268
S03:S03450 filtration, NaOH hydrolysis, NaBH4 reduction Mapping: 1472282
S03:S03114 filtration, no acidification Mapping: 1472091
S03:S03115 filtration, ortho-phthalaldehyde reaction Mapping: 1472092
S03:S03116 filtration, oxidation Mapping: 1472093
S03:S03117 filtration, plating Mapping: 1472094
S03:S03454 filtration, precipitation, acidification Mapping: 1538378
S03:S03118 filtration, purging, cryogenic trapping Mapping: 1472095
S03:S03119 filtration, reaction with orthophthalic acid Mapping: 1472096
S03:S03420 filtration, sudan-1 synthesis, SPE extraction, HPLC purification Mapping: 1472249
S03:S03120 filtration, suspension of residue in buffer solution, collection of liberated DMS Mapping: 1472098
S03:S03121 filtration, thin-film preparation Mapping: 1472099
S03:S03446 filtration, UV digestion Mapping: 1472277
S03:S03413 filtration, water leaching Mapping: 1472241
S03:S03414 filtration, water leaching, acid hydrolysis of the leachate Mapping: 1472242
S03:S03415 filtration, water leaching, acid hydrolysis of the residue Mapping: 1472243
S03:S037 fixed volume sampling, sieving, picking Mapping: 1472307
S03:S03122 flux-diluted fused bead preparation Mapping: 1472100
S03:S038 grazing experiment based on the method of Gifford (1993) Mapping: 1472317
S03:S0351 H2O2 + 1M ammonium acetate leaching at pH 2 Mapping: 1472290
S03:S03407 high temperature reduction in contact with carbon Mapping: 1472234
S03:S03404 high temperature reduction in contact with zinc Mapping: 1472231
S03:S03123 hydrolysis Mapping: 1472101
S03:S039 identification by optical microscopy Mapping: 1472328
S03:S03125 ignition at 400C Mapping: 1472103
S03:S03127 in-situ incubation Mapping: 1472104
S03:S03128 in-situ incubation dilution experiment Mapping: 1472105
S03:S03129 in-situ light and dark bottle incubation Mapping: 1472106
S03:S03131 in-situ pore water sampling, filtration Mapping: 1472174
S03:S03132 in-situ pore water sampling, filtration, chelation, solvent extraction Mapping: 1472175
S03:S0310 incubation Mapping: 1472075
S03:S0311 incubation at constant temperature Mapping: 1472086
S03:S03134 incubation at full natural light level Mapping: 1472177
S03:S0312 incubation in filtered seawater Mapping: 1472097
S03:S03133 incubation in the dark Mapping: 1472176
S03:S03135 incubation under ultra-violet light Mapping: 1472178
S03:S03179 isotope-labelled tracer addition, antibiotic poisoning, incubation in the dark, cascade filtration Mapping: 1472144
S03:S03180 isotope-labelled tracer addition, antibiotic poisoning, incubation in the dark, filtration Mapping: 1472146
S03:S03182 isotope-labelled tracer addition, azide poisoning, incubation at unspecified light level, cascade filtration Mapping: 1472148
S03:S03183 isotope-labelled tracer addition, azide poisoning, incubation at unspecified light level, filtration Mapping: 1472149
S03:S03173 isotope-labelled tracer addition, DCMU poisoning, incubation at unspecified light level, cascade filtration Mapping: 1472138
S03:S03174 isotope-labelled tracer addition, DCMU poisoning, incubation at unspecified light level, filtration Mapping: 1472139
S03:S03184 isotope-labelled tracer addition, in-situ incubation, cascade filtration Mapping: 1472150
S03:S03185 isotope-labelled tracer addition, in-situ incubation, filtration Mapping: 1472151
S03:S03197 isotope-labelled tracer addition, incubation at different light levels, cascade filtration Mapping: 1472164
S03:S03198 isotope-labelled tracer addition, incubation at different light levels, filtration Mapping: 1472165
S03:S03200 isotope-labelled tracer addition, incubation at unspecified light level, cascade filtration Mapping: 1472168
S03:S03202 isotope-labelled tracer addition, incubation at unspecified light level, filtration Mapping: 1472169
S03:S03210 isotope-labelled tracer addition, incubation in the dark, filtration Mapping: 1472183
S03:S03444 isotope-labelled tracer addition, incubation, filtration, acidification Mapping: 1472275
S03:S03443 isotope-labelled tracer addition, incubation, filtration, acidification, gas trapping Mapping: 1472274
S03:S03441 isotope-labelled tracer addition, incubation, filtration, indophenol synthesis, SPE extraction Mapping: 1472272
S03:S03421 isotope-labelled tracer addition, incubation, filtration, sudan-1 synthesis, SPE extraction, HPLC purification Mapping: 1472250
S03:S03215 isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, cascade filtration Mapping: 1472188
S03:S03401 isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, cascade filtration, acidification Mapping: 1472228
S03:S03216 isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration Mapping: 1472189
S03:S03217 isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration, acidification Mapping: 1472190
S03:S03439 isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration, acidification, gas trapping Mapping: 1472269
S03:S0401 isotope-labelled tracer addition, pulse-chase incubations, fixation, SYBR Green I staining, flow sorting Mapping: 1472340
S03:S03427 isotopic dilution time-series incubations, filtration Mapping: 1472256
S03:S03408 laboratory rock sample leaching Mapping: 1472235
S03:S03136 leaching Mapping: 1472179
S03:S0341 leaching with 1M ammonium acetate at pH 7 Mapping: 1472237
S03:S03137 light and dark bottle incubation Mapping: 1472180
S03:S03456 marine snow catcher sampling, settling Mapping: 1538380
S03:S03227 melting of core section Mapping: 1472201
S03:S03138 mesocosm simulated resuspension Mapping: 1472181
S03:S0313 methanol extraction Mapping: 1472107
S03:S03228 micromilling Mapping: 1472202
S03:S0352 Millipore prefiltration Mapping: 1472291
S03:S0353 Millipore prefiltration purging, cryogenic trapping Mapping: 1472292
S03:S0354 NaOH hydrolysis Mapping: 1472293
S03:S03139 no acidification Mapping: 1472108
S03:S0314 no preservation and no staining Mapping: 1472109
S03:S0315 no staining Mapping: 1472117
S03:S03140 not applicable Mapping: 1472110
S03:S0316 not specified Mapping: 1472124
S03:S03142 on-deck incubation Mapping: 1472111
S03:S03437 on-deck incubation at simulated in-situ light level, DCMU poisoning Mapping: 1472267
S03:S0317 on-deck incubation dilution experiment Mapping: 1472135
S03:S0318 on-deck incubation with nutrients Mapping: 1472145
S03:S03143 on-deck incubation with nutrients, filtration Mapping: 1472112
S03:S0319 on-deck incubation without nutrients Mapping: 1472156
S03:S03144 on-deck incubation without nutrients, filtration Mapping: 1472113
S03:S03145 on-deck light and dark bottle incubation Mapping: 1472114
S03:S03146 on-deck mesocosm incubation Mapping: 1472115
S03:S03149 oxalic acid extraction Mapping: 1472116
S03:S03150 oxidation Mapping: 1472118
S03:S03234 parallel incubations with and without added grazers Mapping: 1472207
S03:S0320 parallel incubations with and without grazers, acridine orange staining Mapping: 1472167
S03:S03236 parallel screened water incubations with and without added grazers, grazer removal, filtration Mapping: 1472209
S03:S03235 parallel screened water incubations with and without added grazers, grazer removal, filtration, acidification Mapping: 1472208
S03:S03151 persulphate digestion Mapping: 1472119
S03:S03416 photolytic conversion to NO Mapping: 1472244
S03:S0321 picking Mapping: 1472182
S03:S03153 plating Mapping: 1472121
S03:S03154 polyacrylamide gel probe sampling Mapping: 1472122
S03:S0323 polymerase chain reaction with p1-7 primer; serial dilution Mapping: 1472203
S03:S0324 polymerase chain reaction with p3-42 primer; serial dilution Mapping: 1472210
S03:S0322 polymerase chain reaction with True Agg58 primer; serial dilution Mapping: 1472193
S03:S0325 polymerase chain reaction with universal primer; serial dilution Mapping: 1472211
S03:S0326 preservation and no staining Mapping: 1472212
S03:S03422 preservation, filtration Mapping: 1472251
S03:S03423 preservation, filtration, SYBR Green I staining, flow sorting Mapping: 1472252
S03:S03403 protocol of Barber et al. (1994) Mapping: 1472230
S03:S03156 purging, cryogenic trapping Mapping: 1472123
S03:S03428 purging, sorbent tube trapping Mapping: 1472257
S03:S0357 PvI incubation, acidification to remove residual inorganic 14C Mapping: 1472295
S03:S0355 PvI Incubation, cascade filtration Mapping: 1472294
S03:S0358 PvI incubation, filtration Mapping: 1472296
S03:S0328 screening, in-situ incubation dilution experiment Mapping: 1472213
S03:S0329 screening, on-deck incubation dilution experiment Mapping: 1472214
S03:S0330 sediment trapping Mapping: 1472216
S03:S03160 sediment trapping, acetone extraction Mapping: 1472125
S03:S03161 sediment trapping, acid digestion Mapping: 1472126
S03:S03162 sediment trapping, acid hydrolysis Mapping: 1472127
S03:S03163 sediment trapping, acidification Mapping: 1472128
S03:S03164 sediment trapping, combustion Mapping: 1472129
S03:S03431 sediment trapping, digestion, purification, plating Mapping: 1472261
S03:S03165 sediment trapping, methanol extraction Mapping: 1472130
S03:S03166 sediment trapping, no acidification Mapping: 1472131
S03:S03167 sediment trapping, oxidation Mapping: 1472132
S03:S03168 sediment trapping, solvent extraction Mapping: 1472133
S03:S03169 sediment trapping, volume measurement, drying Mapping: 1472134
S03:S03424 separation in bromoform Mapping: 1472253
S03:S03171 shower-head equilibration with air, drying Mapping: 1472136
S03:S0331 sieving and picking under an optical microscope Mapping: 1472217
S03:S03455 sieving, picking Mapping: 1538379
S03:S03172 siphoning Mapping: 1472137
S03:S0332 size fractionation Mapping: 1472218
S03:S03418 solvent extraction Mapping: 1472246
S03:S03411 Soxhlet extraction Mapping: 1472239
S03:S03406 SYBR Green I staining Mapping: 1472233
S03:S03175 tracer doping, antibiotic poisoning, incubation at 100uE/m2/s light level, cascade filtration Mapping: 1472140
S03:S03176 tracer doping, antibiotic poisoning, incubation at 100uE/m2/s light level, filtration Mapping: 1472141
S03:S03177 tracer doping, antibiotic poisoning, incubation at 188uE/m2/s light level, cascade filtration Mapping: 1472142
S03:S03178 tracer doping, antibiotic poisoning, incubation at 188uE/m2/s light level, filtration Mapping: 1472143
S03:S03181 tracer doping, azide poisoning, incubation at 100uE/m2/s light level, cascade filtration Mapping: 1472147
S03:S03186 tracer doping, incubation at 100uE/m2/s light level, cascade filtration Mapping: 1472152
S03:S03187 tracer doping, incubation at 100uE/m2/s light level, diffusion extraction of gas Mapping: 1472153
S03:S03188 tracer doping, incubation at 100uE/m2/s light level, filtration Mapping: 1472154
S03:S03189 tracer doping, incubation at 188uE/m2/s light level, cascade filtration Mapping: 1472155
S03:S03190 tracer doping, incubation at 188uE/m2/s light level, diffusion extraction of gas Mapping: 1472157
S03:S03191 tracer doping, incubation at 188uE/m2/s light level, filtration Mapping: 1472158
S03:S03192 tracer doping, incubation at 23uE/m2/s light level, filtration Mapping: 1472159
S03:S03193 tracer doping, incubation at 530uE/m2/s light level, cascade filtration Mapping: 1472160
S03:S03194 tracer doping, incubation at 530uE/m2/s light level, filtration Mapping: 1472161
S03:S03195 tracer doping, incubation at 80uE/m2/s light level, cascade filtration Mapping: 1472162
S03:S03196 tracer doping, incubation at 80uE/m2/s light level, filtration Mapping: 1472163
S03:S03204 tracer doping, incubation at unspecified light level, filtration, acidification Mapping: 1472170
S03:S03205 tracer doping, incubation at unspecified light levels, filtration, acidification Mapping: 1472171
S03:S03207 tracer doping, incubation in the dark Mapping: 1472172
S03:S03208 tracer doping, incubation in the dark, cascade filtration Mapping: 1472173
S03:S03211 tracer doping, on-deck incubation Mapping: 1472184
S03:S03212 tracer doping, on-deck incubation at full natural light level, cascade filtration Mapping: 1472185
S03:S03213 tracer doping, on-deck incubation at full natural light level, filtration Mapping: 1472186
S03:S03214 tracer doping, on-deck incubation at simulated in-situ light level Mapping: 1472187
S03:S03233 unfiltered seawater incubation in the dark Mapping: 1472206
S03:S0333 unspecified staining Mapping: 1472219
S03:S0359 UV digestion Mapping: 1472297
S03:S0334 vacuum filtration Mapping: 1472220
S03:S0335 variable volume sampling, sieving, picking Mapping: 1472221
S03:S03218 volume measurement, drying Mapping: 1472191
S03:S03220 wet sieving Mapping: 1472194
S03:S03221 wet sieving, acid digestion Mapping: 1472195
S03:S03222 wet sieving, acid digestion, stannous chloride reduction Mapping: 1472196
S03:S03223 wet sieving, acidification Mapping: 1472197
S03:S03224 wet sieving, drying Mapping: 1472198
S03:S03225 wet sieving, ignition at 400C Mapping: 1472199
S03:S03226 wet sieving, no acidification Mapping: 1472200

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